SdHlW SdHlW_M_g KAUST Clara Stanschewski SdWRepPt_M_g SdWRepPt KAUST Clara Stanschewski StmDiaBse_M_mm StmDiaBse KAUST Clara Stanschewski Quinoa ontology StmLodg KAUST StmLodg_E_1to9 Clara Stanschewski PcleCol_E_4to16 PcleCol Clara Stanschewski KAUST SdAvgGreen_Comp_rgb KAUST Clara Stanschewski SdAvgGreen PcleLfs_E_1to7 PcleLfs KAUST Clara Stanschewski KAUST Clara Stanschewski PlotHomo_E_1to7 PlotHomo PtHt KAUST Clara Stanschewski PtHt_M_cm TGW_M_g KAUST Clara Stanschewski TGW KAUST Clara Stanschewski StmBrk StmBrk_E_1to9 Clara Stanschewski SdWpPt_C_g SdWpPt KAUST BGDBM_M_g KAUST Clara Stanschewski BGDBM Clara Stanschewski PltNoHv_Ct_plant PltNoHv KAUST GrStg_E_BBCH KAUST Clara Stanschewski GrStg LfMgn_E_1to5 KAUST Clara Stanschewski LfMgn Clara Stanschewski SdAvgBlue_Comp_rgb SdAvgBlue KAUST PcleShp_E_1to3 KAUST Clara Stanschewski PcleShp SdA Clara Stanschewski SdA_Comp_mm KAUST SdSht KAUST Clara Stanschewski SdSht_E_1to7 PcleLng_M_cm KAUST PcleLng Clara Stanschewski PlotCov_E_1to9 PlotCov KAUST Clara Stanschewski StmLy_E_1to9 KAUST StmLy Clara Stanschewski SdPrm KAUST SdPrm_Comp_mm Clara Stanschewski StmStr_E_0to1 Clara Stanschewski StmStr KAUST KAUST Clara Stanschewski GH_E_1to7 GH Brnch_E_1to7 Brnch KAUST Clara Stanschewski KAUST SigPcle SigPcle_Ct_panicle Clara Stanschewski Clara Stanschewski KAUST StmAng StmAng_E_1to7 StmDiaPcle_M_mm KAUST Clara Stanschewski StmDiaPcle StmCol_E_4to15 StmCol KAUST Clara Stanschewski attribute KAUST AGDBM Clara Stanschewski AGDBM_M_g KAUST Clara Stanschewski SdAvgRed SdAvgRed_Comp_rgb KAUST Clara Stanschewski PcleDen_E_1to7 PcleDen Clara Stanschewski SdWpPlot_M_g SdWpPlot KAUST SdGerm SdGerm_M_pct KAUST Clara Stanschewski KAUST Clara Stanschewski StmLfShp StmLfShp_E_1to2 AxlPig_E_0to1 KAUST AxlPig Clara Stanschewski HI KAUST Clara Stanschewski HI_C_pct KAUST Clara Stanschewski PltNoHvRp PltNoHvRp_Ct_plant PcleAng_E_1to7 KAUST Clara Stanschewski PcleAng acronym entity Shape PcleShp Panicle Panicle shape Classified into one of the three categories: glomerulate, intermediate, or amarantiform PlotCov Plot coverage Percentage of the plot covered, 1 = poor to 7 = good establishment Coverage Plot Stem leaf shape 1-2 Seed SdPrm Seed average perimeter Average perimeter of the seeds from image analysis average perimeter Panicle shape 1-3-5 Panicle leafiness estimation None Seed yield per plot measurement None Total harvested seed mass per plant may be calculated from number of plants harvested and the seed mass of all plants in the plot (SdWtpPlot/PltNoHv) SdWpPt Seed yield per plant Seed Yield per plant Panicle density Scored from 1 = lax (loose) with panicle axes easily visible to 7 = tight and compact panicles PcleDen Panicle Density Stem diameter near plant base measurement None Seed yield per plot Yield total SdWpPlot Harvesting the panicles remaining per plot while excluding borders, and adding the weight to that from the four representative plants, seed dried in oven to constant weight Seed None Plot population homogeneity estimation Seed yield per plant computation None Stem lying incidence estimation None Stem color StmCol Color Categorized into green (13), red (4), or no pigmentation (15) Stem Seed shattering estimation None None Stem leaf shape estimation Stem striae estimation None rgb StmLodg Stem lodging incidence Stem Lodging incidence Plants are prostrate, on or near the ground, with intact stems; assessing the percentage of the plot affected g PlotHomo Plot Plot population homogeneity Judgment of homogeneity of the accession, 1 = homogeneous to 7 = mixed Population homogeneity Plant height measurement None Panicle length measurement None Panicle density 1-3-5-7 Plant below-ground dry biomass BGDBM Plant If possible, root biomass could also be measured (especially when plants are growing in sandy soil) Below-ground dry biomass Panicle axis angle Axis angle The angle at which the majority of panicle axes are leaning, measured between an upright panicle on the verticle and a panicle pointing towards the ground Panicle PcleAng Panicle color Categorized according to the color scoring card Color Panicle PcleCol None Growth stage estimation AGDBM Cutting plants at the very base with secateurs and drying the entire above-ground section of the plant. Recording total dry weight and number of plants that make up total dry weight. Divide total weight with number of plants to give weight per plant Above-ground dry biomass Plant Plant above-ground dry biomass None Stem diameter under the panicle measurement Stem color 13-4-15 Seed average area Average area of the seeds from image analysis SdA average area Seed None Leaf margin estimation None Panicle density estimation Panicle color 13-16-4-7-15 None Number of plants harvested per plot counting Stem lying incidence 1-3-5-7-9 Stem striae 0-1 Stem angle estimation None Seed average perimeter computation None Leafiness PcleLfs Scored from 1 = no leaves to 7 = many leaves Panicle leafiness Panicle None Seed yield for representative plants measurement Havest index HI Yield/ above-ground biomass Plant Harvest index Stem breakage incidence 1-3-5-7-9 Plant Score for the overall amount of side branches of representative plants in a plot, ignoring very small and spindly branches, ranging from 1 = no branches to 7 = bushy plant with many major lateral branches Plant branchiness Branchiness Brnch scale_of Breakage incidence Stem Stems are broken or detached, assessing the percentage of the plot affected Stem breakage incidence StmBrk Plant above-ground dry biomass measurement None Numerical seed color red value, RGB R Component from image analysis average red color SdAvgRed Seed average red color Seed Stem breakage incidence estimation None Numerical seed color green value, RGB G Component from image analysis Seed average green color average green color SdAvgGreen Seed Plot coverage 1-3-5-7-9 % Leaf Margin Leaf margins are classified into 3 groups Leaf margin LfMgn Stem Stem lying incidence StmLy Lying incidence Stem of the plant is not emerging straight up from the soil but has a kink at the base, growing along the ground before rising; assessing the percentage of the plot affected Seed average red color computation None Length of the primary panicle measured with the same stick. Measured from the base of the panicle to the tip Panicle PcleLng Length Panicle length Panicle axis angle 1-3-5-7 Growth stage GrStg Phenological growth stage; very important to record at mature phenotyping Plant Growth stage mm Grain persistence in the plant at physiological maturity. Assessing how easy seeds fall off the panicle upon light touch: 1 = No seeds falling to 7 = a lot of seeds falling Seed Shattering Seed shattering SdSht panicle Seed average green color computation None None Thousand Grain Weight measurement Diameter at the plant base Thickness of the stem measured with calipers at the middle of the bottom third of the plant stem Stem diameter near plant base Stem StmDiaBse SdHlW Seed hectoliter weight Hectoliter weight Hectoliter weight, or specific weight of seeds: Estimation of density, determined by weighing all seeds fitting into a 100 ml volume Seed Height of the most representative plants of the plot, usually from the middle of the plot, measured with a long measuring stick from soil to the tip of the panicle. If more than one distinct phenotype is present, more than one plant may be recorded in a new row of the spreadsheet, with all phenotypes that are differing recorded separately PtHt Plant Plant height Height Panicle color estimation None Seed Tested in petri dishes (%) Seed germination rate SdGerm Germination rate None Stem color estimation StmLfShp Stem leaf shape Leaf shape Stem Leaves of the stem are categorized into two groups: rhomboidal (1) and triangular (2) Stem angle 1-3-5-7 Leaf margin 1-3-5 None Axil pigmentation estimation None Panicle shape estimation Stem angle The angle at which the majority of plants are leaning, measured between the vertical axis and the horizontal axis Stem Angle StmAng None Number of representative plants harvested counting None Plant branchiness estimation Seed average blue color computation None Thickness of the stem measured just underneath the main panicle StmDiaPcle Stem diameter under the panicle Stem Diameter under the panicle None Seed average area computation Thousand Grain Weight (TGW), the weight of 1000 seeds Thousand Grain Weight Thousand grain weight Seed TGW Plant below-ground dry biomass measurement None SigPcle Number of significant panicles Panicle Number of significant Count of the number of significant panicles, i.e., larger panicles, near the top of the plant, harvestable, that provide a major contribution to the seed harvested from the plant Four categories of growth habit described in images on the scoring card. Here the focus lies on whether branching is present from the base of the plant and if a main inflorescence can be identified Plant growth habit GH Plant Growth habit Plants harvested PltNoHv Plot Number of plants harvested per plot Total number of plants that were harvested of the plot. None Panicle axis angle estimation None Seed germination rate measurement Stem striae Presence (1) absence (0) scoring of stem streaks or stripes Stem Striae StmStr Plot population homogeneity 1-3-5-7 plant cm Plot coverage estimation None Panicle leafiness 1-3-5-7 Plant growth habit 1-3-5-7 BBCH variable_of Plant branchiness 1-3-5-7 Axil pigmentation 0-1 Seed mass of approximately four representative plants that were harvested from the center of the plot (seed should be dried to constant weight) Seed yield for representative plants Seed Yield of representative plants SdWRepPt None Stem lodging incidence estimation None Plant growth habit estimation Stem lodging incidence 1-3-5-7-9 Seed hectoliter weight measurement None Harvest index computation None AxlPig Presence (1) absence (0) scoring of pigmented axils Pigmentation Axil pigmentation Axil Number of representative plants harvested Plot Count the number of plants that were harvested seperately from the majority of the plot, as representative plants. Representative plants harvested PltNoHvRp Number of significant panicles counting None Seed average blue color average blue color Seed Numerical seed color blue component, RGB B Component from image analysis SdAvgBlue Seed shattering 1-3-5-7 method_of