SdWpPlot SdWpPlot_M_g KAUST Clara Stanschewski SdWpPt_C_g Clara Stanschewski SdWpPt KAUST StmLfShp_E_1to2 StmLfShp Clara Stanschewski KAUST attribute SdWRepPt Clara Stanschewski KAUST SdWRepPt_M_g GrStg_E_BBCH GrStg Clara Stanschewski KAUST Clara Stanschewski KAUST PcleAng PcleAng_E_1to7 PcleLfs Clara Stanschewski PcleLfs_E_1to7 KAUST Clara Stanschewski KAUST SigPcle_Ct_panicle SigPcle SdGerm_M_pct Clara Stanschewski KAUST SdGerm PltNoHv_Ct_plant PltNoHv KAUST Clara Stanschewski AGDBM AGDBM_M_g Clara Stanschewski KAUST SdAvgGreen SdAvgGreen_Comp_rgb Clara Stanschewski KAUST StmLy_E_1to9 KAUST StmLy Clara Stanschewski KAUST Clara Stanschewski StmStr_E_0to1 StmStr StmDiaBse KAUST StmDiaBse_M_mm Clara Stanschewski HI Clara Stanschewski HI_C_pct KAUST StmDiaPcle KAUST StmDiaPcle_M_mm Clara Stanschewski StmAng StmAng_E_1to7 Clara Stanschewski KAUST KAUST SdA Clara Stanschewski SdA_Comp_mm PltNoHvRp_Ct_plant PltNoHvRp Clara Stanschewski KAUST Clara Stanschewski KAUST SdSht SdSht_E_1to7 Clara Stanschewski PcleCol_E_4to16 KAUST PcleCol Clara Stanschewski KAUST LfMgn LfMgn_E_1to5 KAUST SdPrm SdPrm_Comp_mm Clara Stanschewski AxlPig_E_0to1 AxlPig Clara Stanschewski KAUST SdAvgBlue_Comp_rgb Clara Stanschewski KAUST SdAvgBlue SdHlW_M_g SdHlW Clara Stanschewski KAUST KAUST PtHt_M_cm PtHt Clara Stanschewski PcleDen_E_1to7 Clara Stanschewski KAUST PcleDen PlotCov KAUST PlotCov_E_1to9 Clara Stanschewski Clara Stanschewski PcleLng KAUST PcleLng_M_cm Clara Stanschewski StmLodg KAUST StmLodg_E_1to9 KAUST BGDBM BGDBM_M_g Clara Stanschewski PlotHomo_E_1to7 Clara Stanschewski KAUST PlotHomo StmCol Clara Stanschewski KAUST StmCol_E_4to15 StmBrk_E_1to9 Clara Stanschewski KAUST StmBrk GH Clara Stanschewski KAUST GH_E_1to7 PcleShp Clara Stanschewski PcleShp_E_1to3 KAUST entity KAUST SdAvgRed_Comp_rgb Clara Stanschewski SdAvgRed Clara Stanschewski KAUST TGW_M_g TGW Quinoa ontology Brnch_E_1to7 Clara Stanschewski Brnch KAUST acronym Plot Percentage of the plot covered, 1 = poor to 7 = good establishment Coverage Plot coverage PlotCov Seed Seed average green color SdAvgGreen average green color Numerical seed color green value, RGB G Component from image analysis PtHt Height Plant height Height of the most representative plants of the plot, usually from the middle of the plot, measured with a long measuring stick from soil to the tip of the panicle. If more than one distinct phenotype is present, more than one plant may be recorded in a new row of the spreadsheet, with all phenotypes that are differing recorded separately Plant average red color Numerical seed color red value, RGB R Component from image analysis SdAvgRed Seed Seed average red color None Panicle density estimation None Stem lying incidence estimation Thousand Grain Weight (TGW), the weight of 1000 seeds Thousand Grain Weight Seed Thousand grain weight TGW Above-ground dry biomass Plant Cutting plants at the very base with secateurs and drying the entire above-ground section of the plant. Recording total dry weight and number of plants that make up total dry weight. Divide total weight with number of plants to give weight per plant Plant above-ground dry biomass AGDBM Seed average blue color Seed average blue color SdAvgBlue Numerical seed color blue component, RGB B Component from image analysis Seed average area Average area of the seeds from image analysis SdA Seed average area GrStg Growth stage Phenological growth stage; very important to record at mature phenotyping Plant Growth stage None Stem diameter near plant base measurement g SdWpPlot Yield total Seed yield per plot Seed Harvesting the panicles remaining per plot while excluding borders, and adding the weight to that from the four representative plants, seed dried in oven to constant weight Seed shattering 1-3-5-7 Panicle color 13-16-4-7-15 Seed average area computation None Stem angle 1-3-5-7 StmStr Stem striae Striae Presence (1) absence (0) scoring of stem streaks or stripes Stem Seed average red color computation None Plant branchiness 1-3-5-7 Leaf margin 1-3-5 Stem leaf shape 1-2 Plot Total number of plants that were harvested of the plot. Number of plants harvested per plot PltNoHv Plants harvested Number of significant panicles counting None Stem StmLodg Stem lodging incidence Lodging incidence Plants are prostrate, on or near the ground, with intact stems; assessing the percentage of the plot affected Panicle shape estimation None Panicle axis angle estimation None mm Seed yield per plant computation None Categorized into green (13), red (4), or no pigmentation (15) Color StmCol Stem color Stem Plot coverage 1-3-5-7-9 Seed average blue color computation None average perimeter Seed Average perimeter of the seeds from image analysis SdPrm Seed average perimeter PlotHomo Plot Plot population homogeneity Population homogeneity Judgment of homogeneity of the accession, 1 = homogeneous to 7 = mixed Stem lying incidence StmLy Stem Lying incidence Stem of the plant is not emerging straight up from the soil but has a kink at the base, growing along the ground before rising; assessing the percentage of the plot affected Stem breakage incidence 1-3-5-7-9 Plant growth habit estimation None Four categories of growth habit described in images on the scoring card. Here the focus lies on whether branching is present from the base of the plant and if a main inflorescence can be identified GH Plant growth habit Growth habit Plant rgb StmDiaPcle Stem Diameter under the panicle Thickness of the stem measured just underneath the main panicle Stem diameter under the panicle Number of representative plants harvested counting None Stem StmLfShp Leaf shape Leaves of the stem are categorized into two groups: rhomboidal (1) and triangular (2) Stem leaf shape Classified into one of the three categories: glomerulate, intermediate, or amarantiform PcleShp Panicle shape Panicle Shape % None Stem leaf shape estimation Leaf margin estimation None PcleCol Panicle Categorized according to the color scoring card Panicle color Color plant None Stem lodging incidence estimation Length of the primary panicle measured with the same stick. Measured from the base of the panicle to the tip PcleLng Panicle Panicle length Length Panicle leafiness PcleLfs Panicle Leafiness Scored from 1 = no leaves to 7 = many leaves Plot population homogeneity estimation None None Plant branchiness estimation None Seed average green color computation variable_of Stem lying incidence 1-3-5-7-9 StmDiaBse Thickness of the stem measured with calipers at the middle of the bottom third of the plant stem Stem diameter near plant base Stem Diameter at the plant base None Stem striae estimation Growth stage estimation None None Stem angle estimation Total harvested seed mass per plant may be calculated from number of plants harvested and the seed mass of all plants in the plot (SdWtpPlot/PltNoHv) Seed yield per plant Yield per plant SdWpPt Seed Seed shattering estimation None None Plot coverage estimation Seed Yield of representative plants Seed mass of approximately four representative plants that were harvested from the center of the plot (seed should be dried to constant weight) Seed yield for representative plants SdWRepPt None Seed average perimeter computation method_of Panicle PcleAng The angle at which the majority of panicle axes are leaning, measured between an upright panicle on the verticle and a panicle pointing towards the ground Panicle axis angle Axis angle Axil pigmentation 0-1 Yield/ above-ground biomass Plant Havest index HI Harvest index None Plant below-ground dry biomass measurement Plant height measurement None Number of representative plants harvested PltNoHvRp Plot Count the number of plants that were harvested seperately from the majority of the plot, as representative plants. Representative plants harvested Seed hectoliter weight measurement None SdSht Seed shattering Seed Shattering Grain persistence in the plant at physiological maturity. Assessing how easy seeds fall off the panicle upon light touch: 1 = No seeds falling to 7 = a lot of seeds falling Panicle PcleDen Scored from 1 = lax (loose) with panicle axes easily visible to 7 = tight and compact panicles Density Panicle density Number of significant Count of the number of significant panicles, i.e., larger panicles, near the top of the plant, harvestable, that provide a major contribution to the seed harvested from the plant Panicle Number of significant panicles SigPcle Axil pigmentation estimation None Stems are broken or detached, assessing the percentage of the plot affected Breakage incidence Stem breakage incidence StmBrk Stem Panicle length measurement None Stem angle The angle at which the majority of plants are leaning, measured between the vertical axis and the horizontal axis Stem Angle StmAng Panicle shape 1-3-5 Seed germination rate measurement None BBCH cm None Plant above-ground dry biomass measurement Margin Leaf margin Leaf Leaf margins are classified into 3 groups LfMgn Stem striae 0-1 AxlPig Axil pigmentation Axil Pigmentation Presence (1) absence (0) scoring of pigmented axils Plant growth habit 1-3-5-7 BGDBM Plant below-ground dry biomass Plant Below-ground dry biomass If possible, root biomass could also be measured (especially when plants are growing in sandy soil) None Stem breakage incidence estimation Harvest index computation None None Thousand Grain Weight measurement Number of plants harvested per plot counting None Plot population homogeneity 1-3-5-7 Stem lodging incidence 1-3-5-7-9 Tested in petri dishes (%) Seed SdGerm Germination rate Seed germination rate Branchiness Plant branchiness Brnch Score for the overall amount of side branches of representative plants in a plot, ignoring very small and spindly branches, ranging from 1 = no branches to 7 = bushy plant with many major lateral branches Plant Panicle density 1-3-5-7 None Stem diameter under the panicle measurement Panicle axis angle 1-3-5-7 Hectoliter weight Seed hectoliter weight Hectoliter weight, or specific weight of seeds: Estimation of density, determined by weighing all seeds fitting into a 100 ml volume SdHlW Seed Stem color 13-4-15 None Stem color estimation Panicle leafiness 1-3-5-7 scale_of panicle None Panicle color estimation Seed yield per plot measurement None None Seed yield for representative plants measurement Panicle leafiness estimation None