Clara Stanschewski PltNoHv_Ct_plant PltNoHv KAUST Clara Stanschewski SdAvgGreen KAUST SdAvgGreen_Comp_rgb PcleCol_E_4to16 KAUST Clara Stanschewski PcleCol SdWpPlot SdWpPlot_M_g Clara Stanschewski KAUST BGDBM_M_g KAUST BGDBM Clara Stanschewski KAUST StmBrk Clara Stanschewski StmBrk_E_1to9 Clara Stanschewski PcleAng KAUST PcleAng_E_1to7 TGW_M_g Clara Stanschewski KAUST TGW StmCol StmCol_E_4to15 KAUST Clara Stanschewski PcleLfs_E_1to7 KAUST PcleLfs Clara Stanschewski StmLy_E_1to9 Clara Stanschewski StmLy KAUST acronym PcleLng Clara Stanschewski KAUST PcleLng_M_cm SdSht_E_1to7 KAUST SdSht Clara Stanschewski SdWpPt_C_g Clara Stanschewski SdWpPt KAUST PcleShp_E_1to3 Clara Stanschewski PcleShp KAUST KAUST Brnch_E_1to7 Brnch Clara Stanschewski PlotHomo_E_1to7 KAUST PlotHomo Clara Stanschewski KAUST PcleDen Clara Stanschewski PcleDen_E_1to7 AxlPig_E_0to1 Clara Stanschewski KAUST AxlPig KAUST Clara Stanschewski SdGerm SdGerm_M_pct KAUST PlotCov PlotCov_E_1to9 Clara Stanschewski Clara Stanschewski KAUST SdA_Comp_mm SdA Clara Stanschewski SigPcle_Ct_panicle KAUST SigPcle LfMgn_E_1to5 LfMgn Clara Stanschewski KAUST StmLodg_E_1to9 Clara Stanschewski StmLodg KAUST StmDiaPcle_M_mm StmDiaPcle Clara Stanschewski KAUST Clara Stanschewski GrStg KAUST GrStg_E_BBCH AGDBM KAUST Clara Stanschewski AGDBM_M_g StmAng_E_1to7 Clara Stanschewski StmAng KAUST KAUST Clara Stanschewski SdAvgRed SdAvgRed_Comp_rgb PltNoHvRp Clara Stanschewski PltNoHvRp_Ct_plant KAUST Clara Stanschewski StmLfShp_E_1to2 StmLfShp KAUST SdPrm Clara Stanschewski KAUST SdPrm_Comp_mm KAUST Clara Stanschewski SdHlW_M_g SdHlW StmDiaBse_M_mm KAUST Clara Stanschewski StmDiaBse Clara Stanschewski GH_E_1to7 GH KAUST Clara Stanschewski PtHt_M_cm KAUST PtHt KAUST HI Clara Stanschewski HI_C_pct KAUST SdAvgBlue_Comp_rgb Clara Stanschewski SdAvgBlue Quinoa ontology KAUST Clara Stanschewski StmStr_E_0to1 StmStr Clara Stanschewski SdWRepPt_M_g KAUST SdWRepPt attribute entity Hectoliter weight SdHlW Seed hectoliter weight Hectoliter weight, or specific weight of seeds: Estimation of density, determined by weighing all seeds fitting into a 100 ml volume Seed Plants are prostrate, on or near the ground, with intact stems; assessing the percentage of the plot affected StmLodg Stem Stem lodging incidence Lodging incidence Seed average blue color Seed SdAvgBlue average blue color Numerical seed color blue component, RGB B Component from image analysis Diameter under the panicle Stem diameter under the panicle StmDiaPcle Thickness of the stem measured just underneath the main panicle Stem Stem striae 0-1 Plant height measurement None Thousand Grain Weight measurement None Stem breakage incidence Stems are broken or detached, assessing the percentage of the plot affected Breakage incidence Stem StmBrk None Stem angle estimation None Number of significant panicles counting Germination rate Seed germination rate Tested in petri dishes (%) Seed SdGerm cm Seed SdAvgGreen average green color Seed average green color Numerical seed color green value, RGB G Component from image analysis panicle Plant Above-ground dry biomass AGDBM Plant above-ground dry biomass Cutting plants at the very base with secateurs and drying the entire above-ground section of the plant. Recording total dry weight and number of plants that make up total dry weight. Divide total weight with number of plants to give weight per plant Leaf margin estimation None Panicle The angle at which the majority of panicle axes are leaning, measured between an upright panicle on the verticle and a panicle pointing towards the ground PcleAng Axis angle Panicle axis angle None Seed germination rate measurement Plant growth habit estimation None Growth stage estimation None Panicle density Panicle Density Scored from 1 = lax (loose) with panicle axes easily visible to 7 = tight and compact panicles PcleDen Thickness of the stem measured with calipers at the middle of the bottom third of the plant stem StmDiaBse Stem diameter near plant base Diameter at the plant base Stem plant Panicle Scored from 1 = no leaves to 7 = many leaves PcleLfs Leafiness Panicle leafiness Leaf margin Leaf margins are classified into 3 groups LfMgn Leaf Margin None Axil pigmentation estimation Panicle leafiness 1-3-5-7 Seed shattering 1-3-5-7 average red color Seed average red color SdAvgRed Numerical seed color red value, RGB R Component from image analysis Seed Stem The angle at which the majority of plants are leaning, measured between the vertical axis and the horizontal axis Stem angle StmAng Angle Seed mass of approximately four representative plants that were harvested from the center of the plot (seed should be dried to constant weight) SdWRepPt Seed Yield of representative plants Seed yield for representative plants Growth stage GrStg Growth stage Plant Phenological growth stage; very important to record at mature phenotyping Panicle color 13-16-4-7-15 Length of the primary panicle measured with the same stick. Measured from the base of the panicle to the tip PcleLng Panicle Panicle length Length Plot Judgment of homogeneity of the accession, 1 = homogeneous to 7 = mixed Plot population homogeneity Population homogeneity PlotHomo Seed average blue color computation None Plant growth habit GH Growth habit Four categories of growth habit described in images on the scoring card. Here the focus lies on whether branching is present from the base of the plant and if a main inflorescence can be identified Plant None Seed average perimeter computation Seed average green color computation None variable_of Representative plants harvested Number of representative plants harvested Count the number of plants that were harvested seperately from the majority of the plot, as representative plants. PltNoHvRp Plot Stem color estimation None None Panicle axis angle estimation None Number of representative plants harvested counting average perimeter Seed average perimeter Seed SdPrm Average perimeter of the seeds from image analysis Seed shattering estimation None PltNoHv Plot Total number of plants that were harvested of the plot. Plants harvested Number of plants harvested per plot Seed hectoliter weight measurement None None Seed yield for representative plants measurement Panicle axis angle 1-3-5-7 Thousand Grain Weight Thousand Grain Weight (TGW), the weight of 1000 seeds TGW Thousand grain weight Seed Coverage PlotCov Percentage of the plot covered, 1 = poor to 7 = good establishment Plot coverage Plot Leaf margin 1-3-5 Plot population homogeneity estimation None Seed Yield per plant Total harvested seed mass per plant may be calculated from number of plants harvested and the seed mass of all plants in the plot (SdWtpPlot/PltNoHv) Seed yield per plant SdWpPt None Panicle density estimation Stem lodging incidence 1-3-5-7-9 None Harvest index computation Grain persistence in the plant at physiological maturity. Assessing how easy seeds fall off the panicle upon light touch: 1 = No seeds falling to 7 = a lot of seeds falling SdSht Seed Seed shattering Shattering Height of the most representative plants of the plot, usually from the middle of the plot, measured with a long measuring stick from soil to the tip of the panicle. If more than one distinct phenotype is present, more than one plant may be recorded in a new row of the spreadsheet, with all phenotypes that are differing recorded separately Height Plant height Plant PtHt None Stem diameter under the panicle measurement None Plot coverage estimation Stem breakage incidence 1-3-5-7-9 None Seed yield per plant computation Stem lodging incidence estimation None Seed average area Average area of the seeds from image analysis Seed average area SdA Seed average red color computation None None Plant branchiness estimation Stem striae Presence (1) absence (0) scoring of stem streaks or stripes StmStr Stem Striae Plot coverage 1-3-5-7-9 Panicle SigPcle Count of the number of significant panicles, i.e., larger panicles, near the top of the plant, harvestable, that provide a major contribution to the seed harvested from the plant Number of significant Number of significant panicles Plot population homogeneity 1-3-5-7 Stem lying incidence Stem Lying incidence StmLy Stem of the plant is not emerging straight up from the soil but has a kink at the base, growing along the ground before rising; assessing the percentage of the plot affected None Plant above-ground dry biomass measurement Panicle PcleShp Shape Classified into one of the three categories: glomerulate, intermediate, or amarantiform Panicle shape Stem color Stem StmCol Categorized into green (13), red (4), or no pigmentation (15) Color Panicle shape 1-3-5 Stem breakage incidence estimation None Seed yield per plot Seed Yield total Harvesting the panicles remaining per plot while excluding borders, and adding the weight to that from the four representative plants, seed dried in oven to constant weight SdWpPlot Plant HI Havest index Harvest index Yield/ above-ground biomass None Panicle length measurement Axil pigmentation 0-1 None Stem striae estimation Plant below-ground dry biomass measurement None Leaves of the stem are categorized into two groups: rhomboidal (1) and triangular (2) StmLfShp Stem leaf shape Stem Leaf shape g Stem diameter near plant base measurement None BBCH Plant Branchiness Score for the overall amount of side branches of representative plants in a plot, ignoring very small and spindly branches, ranging from 1 = no branches to 7 = bushy plant with many major lateral branches Plant branchiness Brnch Number of plants harvested per plot counting None Panicle leafiness estimation None Panicle density 1-3-5-7 None Stem leaf shape estimation BGDBM Plant below-ground dry biomass Plant Below-ground dry biomass If possible, root biomass could also be measured (especially when plants are growing in sandy soil) Stem leaf shape 1-2 scale_of Stem angle 1-3-5-7 Axil AxlPig Axil pigmentation Presence (1) absence (0) scoring of pigmented axils Pigmentation mm None Seed yield per plot measurement Stem color 13-4-15 Stem lying incidence 1-3-5-7-9 None Panicle color estimation None Seed average area computation rgb Plant branchiness 1-3-5-7 % Plant growth habit 1-3-5-7 Panicle shape estimation None method_of None Stem lying incidence estimation Color Panicle color PcleCol Panicle Categorized according to the color scoring card