StmAng_E_1to7 StmAng KAUST Clara Stanschewski AxlPig Clara Stanschewski KAUST AxlPig_E_0to1 PltNoHv_Ct_plant PltNoHv KAUST Clara Stanschewski PcleCol KAUST Clara Stanschewski PcleCol_E_4to16 Clara Stanschewski SdWpPt_C_g SdWpPt KAUST KAUST Clara Stanschewski PltNoHvRp_Ct_plant PltNoHvRp SdAvgRed_Comp_rgb Clara Stanschewski KAUST SdAvgRed Clara Stanschewski SdGerm_M_pct SdGerm KAUST KAUST PlotHomo_E_1to7 PlotHomo Clara Stanschewski SdWRepPt_M_g KAUST Clara Stanschewski SdWRepPt Clara Stanschewski StmCol_E_4to15 StmCol KAUST Clara Stanschewski HI_C_pct HI KAUST KAUST Clara Stanschewski PcleLng PcleLng_M_cm SdSht SdSht_E_1to7 KAUST Clara Stanschewski StmDiaBse_M_mm StmDiaBse Clara Stanschewski KAUST KAUST Clara Stanschewski SdHlW_M_g SdHlW GH Clara Stanschewski KAUST GH_E_1to7 KAUST SdPrm Clara Stanschewski SdPrm_Comp_mm KAUST SigPcle Clara Stanschewski SigPcle_Ct_panicle StmBrk StmBrk_E_1to9 Clara Stanschewski KAUST KAUST Clara Stanschewski AGDBM AGDBM_M_g Clara Stanschewski KAUST PcleLfs PcleLfs_E_1to7 StmLfShp KAUST Clara Stanschewski StmLfShp_E_1to2 SdWpPlot Clara Stanschewski SdWpPlot_M_g KAUST LfMgn_E_1to5 LfMgn KAUST Clara Stanschewski SdAvgGreen_Comp_rgb KAUST Clara Stanschewski SdAvgGreen StmLodg KAUST Clara Stanschewski StmLodg_E_1to9 Clara Stanschewski PcleShp_E_1to3 KAUST PcleShp PcleDen_E_1to7 KAUST PcleDen Clara Stanschewski KAUST Clara Stanschewski StmLy_E_1to9 StmLy Quinoa ontology PcleAng_E_1to7 PcleAng KAUST Clara Stanschewski KAUST GrStg Clara Stanschewski GrStg_E_BBCH Clara Stanschewski PlotCov_E_1to9 PlotCov KAUST TGW KAUST Clara Stanschewski TGW_M_g StmDiaPcle_M_mm StmDiaPcle KAUST Clara Stanschewski KAUST SdAvgBlue SdAvgBlue_Comp_rgb Clara Stanschewski Brnch_E_1to7 KAUST Clara Stanschewski Brnch KAUST SdA Clara Stanschewski SdA_Comp_mm entity acronym KAUST PtHt Clara Stanschewski PtHt_M_cm KAUST Clara Stanschewski StmStr StmStr_E_0to1 KAUST Clara Stanschewski BGDBM_M_g BGDBM attribute Panicle shape 1-3-5 StmDiaBse Stem Thickness of the stem measured with calipers at the middle of the bottom third of the plant stem Stem diameter near plant base Diameter at the plant base Stem of the plant is not emerging straight up from the soil but has a kink at the base, growing along the ground before rising; assessing the percentage of the plot affected Stem Lying incidence Stem lying incidence StmLy GH Plant Growth habit Four categories of growth habit described in images on the scoring card. Here the focus lies on whether branching is present from the base of the plant and if a main inflorescence can be identified Plant growth habit Stem breakage incidence estimation None Panicle Shape Panicle shape PcleShp Classified into one of the three categories: glomerulate, intermediate, or amarantiform g Plot population homogeneity 1-3-5-7 Plant height measurement None None Plant below-ground dry biomass measurement Seed SdWRepPt Seed mass of approximately four representative plants that were harvested from the center of the plot (seed should be dried to constant weight) Seed yield for representative plants Yield of representative plants Stem diameter near plant base measurement None Number of plants harvested per plot counting None Seed yield for representative plants measurement None Seed average perimeter computation None TGW Seed Thousand grain weight Thousand Grain Weight (TGW), the weight of 1000 seeds Thousand Grain Weight Seed average area average area Seed Average area of the seeds from image analysis SdA mm method_of Panicle density estimation None None Seed hectoliter weight measurement Stem leaf shape estimation None Panicle Scored from 1 = lax (loose) with panicle axes easily visible to 7 = tight and compact panicles PcleDen Panicle density Density None Number of representative plants harvested counting None Seed shattering estimation Stem lodging incidence Plants are prostrate, on or near the ground, with intact stems; assessing the percentage of the plot affected Stem StmLodg Lodging incidence None Number of significant panicles counting Yield total Seed Harvesting the panicles remaining per plot while excluding borders, and adding the weight to that from the four representative plants, seed dried in oven to constant weight Seed yield per plot SdWpPlot Stem breakage incidence 1-3-5-7-9 None Panicle length measurement Panicle shape estimation None Seed yield per plant Total harvested seed mass per plant may be calculated from number of plants harvested and the seed mass of all plants in the plot (SdWtpPlot/PltNoHv) Seed Yield per plant SdWpPt Seed yield per plot measurement None Plant growth habit 1-3-5-7 Stem color 13-4-15 Diameter under the panicle Stem Stem diameter under the panicle Thickness of the stem measured just underneath the main panicle StmDiaPcle SdAvgGreen Seed Numerical seed color green value, RGB G Component from image analysis Seed average green color average green color Harvest index computation None Stem Striae StmStr Stem striae Presence (1) absence (0) scoring of stem streaks or stripes StmCol Categorized into green (13), red (4), or no pigmentation (15) Stem Color Stem color BGDBM If possible, root biomass could also be measured (especially when plants are growing in sandy soil) Plant Plant below-ground dry biomass Below-ground dry biomass Seed Seed germination rate Tested in petri dishes (%) Germination rate SdGerm Panicle axis angle estimation None plant Leaf shape Stem leaf shape Stem Leaves of the stem are categorized into two groups: rhomboidal (1) and triangular (2) StmLfShp Panicle color estimation None None Stem lodging incidence estimation Seed SdSht Seed shattering Grain persistence in the plant at physiological maturity. Assessing how easy seeds fall off the panicle upon light touch: 1 = No seeds falling to 7 = a lot of seeds falling Shattering Panicle axis angle The angle at which the majority of panicle axes are leaning, measured between an upright panicle on the verticle and a panicle pointing towards the ground Axis angle PcleAng Panicle Stem angle 1-3-5-7 Stem diameter under the panicle measurement None Plant branchiness Branchiness Plant Score for the overall amount of side branches of representative plants in a plot, ignoring very small and spindly branches, ranging from 1 = no branches to 7 = bushy plant with many major lateral branches Brnch Leaf LfMgn Leaf margins are classified into 3 groups Margin Leaf margin None Growth stage estimation Numerical seed color red value, RGB R Component from image analysis average red color Seed average red color SdAvgRed Seed BBCH Seed shattering 1-3-5-7 SigPcle Count of the number of significant panicles, i.e., larger panicles, near the top of the plant, harvestable, that provide a major contribution to the seed harvested from the plant Number of significant panicles Panicle Number of significant None Axil pigmentation estimation Harvest index Havest index Plant HI Yield/ above-ground biomass Stem color estimation None None Seed average blue color computation Plant above-ground dry biomass Above-ground dry biomass Plant Cutting plants at the very base with secateurs and drying the entire above-ground section of the plant. Recording total dry weight and number of plants that make up total dry weight. Divide total weight with number of plants to give weight per plant AGDBM Growth stage Phenological growth stage; very important to record at mature phenotyping GrStg Plant Growth stage Percentage of the plot covered, 1 = poor to 7 = good establishment PlotCov Coverage Plot Plot coverage Axil pigmentation 0-1 Axil pigmentation Pigmentation Presence (1) absence (0) scoring of pigmented axils AxlPig Axil Leaf margin 1-3-5 Panicle color 13-16-4-7-15 Panicle axis angle 1-3-5-7 The angle at which the majority of plants are leaning, measured between the vertical axis and the horizontal axis Angle StmAng Stem Stem angle Leafiness PcleLfs Panicle leafiness Scored from 1 = no leaves to 7 = many leaves Panicle None Seed yield per plant computation None Leaf margin estimation None Plant branchiness estimation None Stem striae estimation % None Stem angle estimation rgb Stem striae 0-1 None Seed average red color computation None Seed average green color computation panicle None Seed average area computation Categorized according to the color scoring card Panicle color Color Panicle PcleCol Length of the primary panicle measured with the same stick. Measured from the base of the panicle to the tip PcleLng Length Panicle Panicle length Seed germination rate measurement None Representative plants harvested Plot Count the number of plants that were harvested seperately from the majority of the plot, as representative plants. Number of representative plants harvested PltNoHvRp Stem lying incidence 1-3-5-7-9 Panicle leafiness 1-3-5-7 PltNoHv Total number of plants that were harvested of the plot. Plot Plants harvested Number of plants harvested per plot Stem leaf shape 1-2 Average perimeter of the seeds from image analysis Seed average perimeter SdPrm Seed average perimeter None Plot coverage estimation Panicle density 1-3-5-7 Thousand Grain Weight measurement None Plant above-ground dry biomass measurement None Plot coverage 1-3-5-7-9 cm None Panicle leafiness estimation Stem lodging incidence 1-3-5-7-9 SdAvgBlue average blue color Seed average blue color Numerical seed color blue component, RGB B Component from image analysis Seed StmBrk Stem Stem breakage incidence Breakage incidence Stems are broken or detached, assessing the percentage of the plot affected None Stem lying incidence estimation Height PtHt Plant Plant height Height of the most representative plants of the plot, usually from the middle of the plot, measured with a long measuring stick from soil to the tip of the panicle. If more than one distinct phenotype is present, more than one plant may be recorded in a new row of the spreadsheet, with all phenotypes that are differing recorded separately Seed Hectoliter weight, or specific weight of seeds: Estimation of density, determined by weighing all seeds fitting into a 100 ml volume Hectoliter weight SdHlW Seed hectoliter weight Plant branchiness 1-3-5-7 Plot population homogeneity estimation None Plot PlotHomo Plot population homogeneity Judgment of homogeneity of the accession, 1 = homogeneous to 7 = mixed Population homogeneity variable_of scale_of Plant growth habit estimation None